LOC_Os10g40730.1


Description : Expansin-B4 OS=Oryza sativa subsp. japonica (sp|q94lr4|expb4_orysj : 527.0)


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0027699 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0025911 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g40730.1
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.02 Archaeplastida
AMTR_s00111p00059150 evm_27.TU.AmTr_v1... Putative expansin-B2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT4G28250 EXPB3, ATEXPB3,... expansin B3 0.06 Archaeplastida
GSVIVT01030375001 No alias Cell wall.cell wall proteins.expansins.beta-type expansin 0.04 Archaeplastida
Gb_14361 No alias beta-class expansin 0.03 Archaeplastida
LOC_Os02g42650.1 No alias beta-class expansin 0.04 Archaeplastida
LOC_Os03g01260.1 No alias Expansin-B8 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os03g44290.1 No alias Expansin-B12 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g46650.1 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_7765271g0010 No alias No annotation 0.04 Archaeplastida
Pp3c1_37980V3.1 No alias expansin B3 0.03 Archaeplastida
Pp3c22_17770V3.1 No alias expansin B3 0.02 Archaeplastida
Solyc10g018500.1.1 No alias Putative expansin-B2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e002338_P001 No alias Expansin-B2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e005019_P001 No alias Expansin-B12 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e007438_P001 No alias beta-class expansin 0.03 Archaeplastida
Zm00001e015230_P001 No alias beta-class expansin 0.04 Archaeplastida
Zm00001e015336_P002 No alias Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e023169_P003 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e037880_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e037884_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 92 170
IPR007117 Expansin_CBD 183 270
No external refs found!