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  5. LOC_Os10g41460.1

LOC_Os10g41460.1


Description : transcription factor (Trihelix)


Gene families : OG0004573 (Archaeplastida) Phylogenetic Tree(s): OG0004573_tree ,
OG_05_0003159 (LandPlants) Phylogenetic Tree(s): OG_05_0003159_tree ,
OG_06_0003927 (SeedPlants) Phylogenetic Tree(s): OG_06_0003927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g41460.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT2G44730 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.04 Archaeplastida
GSVIVT01003683001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
Solyc01g088820.2.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Solyc08g007170.1.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Zm00001e002375_P001 No alias transcription factor (Trihelix) 0.06 Archaeplastida
Zm00001e024316_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031503 protein-containing complex localization IEP Neighborhood
BP GO:0033566 gamma-tubulin complex localization IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034629 cellular protein-containing complex localization IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!