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  5. LOC_Os10g42439.1

LOC_Os10g42439.1


Description : DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana (sp|f4ivl6|grv2_arath : 3229.0)


Gene families : OG0004674 (Archaeplastida) Phylogenetic Tree(s): OG0004674_tree ,
OG_05_0004341 (LandPlants) Phylogenetic Tree(s): OG_05_0004341_tree ,
OG_06_0006810 (SeedPlants) Phylogenetic Tree(s): OG_06_0006810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42439.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00152000 evm_27.TU.AmTr_v1... DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT2G26890 GRV2, KAM2 DNAJ heat shock N-terminal domain-containing protein 0.15 Archaeplastida
Cre12.g486209 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01015441001 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01015442001 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.1 Archaeplastida
Gb_33273 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_10430431g0010 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.12 Archaeplastida
MA_10430431g0040 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10436902g0010 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g07450.1 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c13_3460V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.06 Archaeplastida
Pp3c4_24650V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.12 Archaeplastida
Smo165973 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc08g021920.4.1 No alias DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 1590 1630
IPR025640 DUF4339 1223 1273
No external refs found!