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  5. AMTR_s00010p00255890

AMTR_s00010p00255890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.388

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00255890

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00181420 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.06 Archaeplastida
AMTR_s00010p00239860 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00038p00175390 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00066p00157030 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00066p00157220 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.08 Archaeplastida
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.02 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os02g51450.2 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os06g12060.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.08 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_81581g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_92135g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
Pp3c4_13990V3.1 No alias Mitochondrial transcription termination factor family protein 0.04 Archaeplastida
Smo77318 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
Solyc02g067960.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.07 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 2 163
No external refs found!