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  5. LOC_Os10g42820.1

LOC_Os10g42820.1


Description : calcium-permeable channel (OSCA)


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001075 (LandPlants) Phylogenetic Tree(s): OG_05_0001075_tree ,
OG_06_0000936 (SeedPlants) Phylogenetic Tree(s): OG_06_0000936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42820.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_06754 No alias calcium-permeable channel (OSCA) 0.06 Archaeplastida
Pp3c17_22430V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
Zm00001e003059_P001 No alias calcium-permeable channel (OSCA) 0.06 Archaeplastida
Zm00001e012117_P001 No alias calcium-permeable channel (OSCA) 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032880 Csc1_N 7 174
IPR003864 RSN1_7TM 368 640
IPR027815 PHM7_cyt 195 357
No external refs found!