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  5. LOC_Os10g42940.1

LOC_Os10g42940.1


Description : ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0003398 (SeedPlants) Phylogenetic Tree(s): OG_06_0003398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42940.1
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00193260 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
AMTR_s00096p00110370 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01029113001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.03 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c12_9900V3.1 No alias ADP-ribosylation factor B1C 0.02 Archaeplastida
Pp3c4_20623V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Zm00001e015538_P002 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e031984_P002 No alias ARF-GTPase 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 176
No external refs found!