AMTR_s00010p00256660 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.394

Description : RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.OTP43 splicing factor

Gene families : OG0010048 (Archaeplastida) Phylogenetic Tree(s): OG0010048_tree ,
OG_05_0010075 (LandPlants) Phylogenetic Tree(s): OG_05_0010075_tree ,
OG_06_0007175 (SeedPlants) Phylogenetic Tree(s): OG_06_0007175_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00010p00256660
Cluster	HCCA: Cluster_218

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0004659	prenyltransferase activity	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016151	nickel cation binding	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	100	131
IPR002885	Pentatricopeptide_repeat	64	96
IPR002885	Pentatricopeptide_repeat	135	178
IPR002885	Pentatricopeptide_repeat	204	247
IPR002885	Pentatricopeptide_repeat	345	389
IPR002885	Pentatricopeptide_repeat	270	318

External Links

No external refs found!