1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g02424.1

LOC_Os11g02424.1


Description : RING-H2 finger protein ATL74 OS=Arabidopsis thaliana (sp|q9lzv8|atl74_arath : 111.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g02424.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.01 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.04 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.01 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G41450 No alias RING/U-box superfamily protein 0.01 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Gb_03946 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_05005 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 Archaeplastida
Gb_08038 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.01 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_32878 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g61470.1 No alias RING-H2-class E3 ligase 0.09 Archaeplastida
LOC_Os02g35440.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g22110.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os07g48680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_15116g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_46635g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_754688g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_816764g0010 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo412606 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc02g068415.1.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g055140.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005300.2.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e022175_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 175 218
No external refs found!