AMTR_s00010p00257650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.404

Description : Nutrient uptake.iron uptake.regulation.IRO/POPEYE transcription factor


Gene families : OG0008661 (Archaeplastida) Phylogenetic Tree(s): OG0008661_tree ,
OG_05_0008071 (LandPlants) Phylogenetic Tree(s): OG_05_0008071_tree ,
OG_06_0005585 (SeedPlants) Phylogenetic Tree(s): OG_06_0005585_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00257650
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g26210.1 No alias transcription factor (bHLH). iron homeostasis regulator (POPEYE) 0.03 Archaeplastida
Zm00001e001834_P001 No alias transcription factor (bHLH). iron homeostasis regulator (POPEYE) 0.03 Archaeplastida
Zm00001e021214_P001 No alias transcription factor (bHLH). iron homeostasis regulator (POPEYE) 0.04 Archaeplastida
Zm00001e035617_P001 No alias transcription factor (bHLH). iron homeostasis regulator (POPEYE) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!