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  5. AMTR_s00010p00258470

AMTR_s00010p00258470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.414

Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component


Gene families : OG0006222 (Archaeplastida) Phylogenetic Tree(s): OG0006222_tree ,
OG_05_0006880 (LandPlants) Phylogenetic Tree(s): OG_05_0006880_tree ,
OG_06_0007401 (SeedPlants) Phylogenetic Tree(s): OG_06_0007401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00258470
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AT3G55160 No alias unknown protein; EXPRESSED IN: 11 plant structures;... 0.05 Archaeplastida
Cre15.g642050 No alias RNA processing.RNA modification.rRNA/tRNA... 0.02 Archaeplastida
GSVIVT01011388001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.05 Archaeplastida
Gb_02094 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 Archaeplastida
Gb_02096 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.06 Archaeplastida
Gb_02097 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.09 Archaeplastida
LOC_Os08g07290.1 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.04 Archaeplastida
Smo74297 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
Solyc03g062650.3.1 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.05 Archaeplastida
Zm00001e040139_P001 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR019442 DUF2428_death-receptor-like 1080 1426
No external refs found!