1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g04600.1

LOC_Os11g04600.1


Description : transcriptional co-activator (BOP)


Gene families : OG0003191 (Archaeplastida) Phylogenetic Tree(s): OG0003191_tree ,
OG_05_0002787 (LandPlants) Phylogenetic Tree(s): OG_05_0002787_tree ,
OG_06_0002815 (SeedPlants) Phylogenetic Tree(s): OG_06_0002815_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g04600.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00115370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.08 Archaeplastida
AT2G41370 BOP2 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.05 Archaeplastida
AT3G57130 BOP1 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.03 Archaeplastida
GSVIVT01033571001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.03 Archaeplastida
Solyc10g079750.2.1 No alias transcriptional co-activator (BOP) 0.03 Archaeplastida
Zm00001e009187_P001 No alias transcriptional co-activator (BOP) 0.03 Archaeplastida
Zm00001e018649_P001 No alias transcriptional co-activator (BOP) 0.06 Archaeplastida
Zm00001e028331_P001 No alias transcriptional co-activator (BOP) 0.06 Archaeplastida
Zm00001e039194_P004 No alias transcriptional co-activator (BOP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 20 57
IPR024228 NPR_central_dom 222 279
IPR020683 Ankyrin_rpt-contain_dom 287 368
No external refs found!