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  5. LOC_Os11g05050.1

LOC_Os11g05050.1


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 109.0)


Gene families : OG0000604 (Archaeplastida) Phylogenetic Tree(s): OG0000604_tree ,
OG_05_0006077 (LandPlants) Phylogenetic Tree(s): OG_05_0006077_tree ,
OG_06_0003766 (SeedPlants) Phylogenetic Tree(s): OG_06_0003766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05050.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00269560 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 Archaeplastida
MA_109804g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_42105g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_762051g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
Solyc09g082780.3.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024286 DUF3700 2 226
No external refs found!