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  5. LOC_Os11g05160.1

LOC_Os11g05160.1


Description : AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana (sp|q8vyj2|ahl1_arath : 167.0)


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0000180 (SeedPlants) Phylogenetic Tree(s): OG_06_0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05160.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00254660 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00040p00224930 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00149p00085280 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 10... 0.03 Archaeplastida
AT2G45850 No alias AT hook motif DNA-binding family protein 0.06 Archaeplastida
AT3G61310 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
AT5G62260 No alias AT hook motif DNA-binding family protein 0.03 Archaeplastida
GSVIVT01026888001 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10434727g0010 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c3_27790V3.1 No alias AT hook motif DNA-binding family protein 0.02 Archaeplastida
Smo410086 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
Solyc06g035430.3.1 No alias AT-hook motif nuclear-localized protein 3 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e009148_P001 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e037798_P002 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida
Zm00001e041401_P002 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 138 251
No external refs found!