AT1G31880 (BRX, NLM9)


Aliases : BRX, NLM9

Description : DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0000629 (SeedPlants) Phylogenetic Tree(s): OG_06_0000629_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31880
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00209000 evm_27.TU.AmTr_v1... Protein BREVIS RADIX OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01015118001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016782001 No alias Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os08g36020.1 No alias Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_651632g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g062880.2.1 No alias Protein Brevis radix-like 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g096110.3.1 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007054_P001 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e007825_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015552_P003 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e041570_P002 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009734 auxin-activated signaling pathway IMP Interproscan
BP GO:0009736 cytokinin-activated signaling pathway IMP Interproscan
BP GO:0009737 response to abscisic acid IMP Interproscan
MF GO:0015250 water channel activity ISS Interproscan
MF GO:0042802 identical protein binding IPI Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048527 lateral root development IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000795 synaptonemal complex IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005539 glycosaminoglycan binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005712 chiasma IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008327 methyl-CpG binding IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009691 cytokinin biosynthetic process IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0032300 mismatch repair complex IEP Neighborhood
CC GO:0032390 MutLbeta complex IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
MF GO:0042834 peptidoglycan binding IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0099086 synaptonemal structure IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
CC GO:1990391 DNA repair complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 139 193
IPR013591 Brevis_radix_dom 289 343
IPR027988 BRX_N 24 56
No external refs found!