LOC_Os11g05660.1


Description : Probable F-box protein At2g36090 OS=Arabidopsis thaliana (sp|q9sih5|fb322_arath : 117.0)


Gene families : OG0001951 (Archaeplastida) Phylogenetic Tree(s): OG0001951_tree ,
OG_05_0001385 (LandPlants) Phylogenetic Tree(s): OG_05_0001385_tree ,
OG_06_0004269 (SeedPlants) Phylogenetic Tree(s): OG_06_0004269_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05660.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Gb_22367 No alias SLY-type gibberellin signal transducer. component F-box... 0.04 Archaeplastida
LOC_Os04g33820.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g06030.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c23_16130V3.1 No alias F-box family protein 0.04 Archaeplastida
Pp3c23_3650V3.1 No alias F-box family protein 0.02 Archaeplastida
Solyc10g083230.1.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 62
No external refs found!