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  5. LOC_Os11g05770.1

LOC_Os11g05770.1


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000302 (SeedPlants) Phylogenetic Tree(s): OG_06_0000302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05770.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00241200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
AMTR_s00103p00131630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.05 Archaeplastida
AT2G36026 No alias Ovate family protein 0.03 Archaeplastida
GSVIVT01009691001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.01 Archaeplastida
MA_31710g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
Mp3g18940.1 No alias transcription factor (OFP) 0.02 Archaeplastida
Solyc02g085500.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024171_P001 No alias transcription factor (OFP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 197 253
No external refs found!