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  5. LOC_Os11g06420.1

LOC_Os11g06420.1


Description : transcription factor (TUB)


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree ,
OG_05_0000295 (LandPlants) Phylogenetic Tree(s): OG_05_0000295_tree ,
OG_06_0000341 (SeedPlants) Phylogenetic Tree(s): OG_06_0000341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g06420.1
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00238180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
Gb_38151 No alias transcription factor (TUB) 0.02 Archaeplastida
Zm00001e015581_P001 No alias transcription factor (TUB) 0.02 Archaeplastida
Zm00001e019166_P001 No alias transcription factor (TUB) 0.01 Archaeplastida
Zm00001e023326_P001 No alias transcription factor (TUB) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000007 Tubby_C 116 435
IPR001810 F-box_dom 52 105
No external refs found!