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  5. AMTR_s00010p00260950

AMTR_s00010p00260950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.449

Description : Solute transport.channels.MIP family.Nodulin-26-like intrinsic protein (NIP-type)


Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0000928 (LandPlants) Phylogenetic Tree(s): OG_05_0000928_tree ,
OG_06_0005586 (SeedPlants) Phylogenetic Tree(s): OG_06_0005586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00260950
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00227660 evm_27.TU.AmTr_v1... Solute transport.channels.MIP family.plasma membrane... 0.01 Archaeplastida
AT2G37170 PIP2B, PIP2;2 plasma membrane intrinsic protein 2 0.01 Archaeplastida
AT4G01470 ATTIP1.3,... tonoplast intrinsic protein 1;3 0.01 Archaeplastida
GSVIVT01004850001 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.02 Archaeplastida
GSVIVT01024235001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 Archaeplastida
Gb_02390 No alias tonoplast intrinsic protein (TIP) 0.01 Archaeplastida
Gb_07454 No alias Nodulin-26-like intrinsic protein (NIP) 0.01 Archaeplastida
Gb_09506 No alias tonoplast intrinsic protein (TIP) 0.05 Archaeplastida
Gb_32302 No alias tonoplast intrinsic protein (TIP) 0.05 Archaeplastida
LOC_Os01g13120.1 No alias tonoplast intrinsic protein (TIP) 0.04 Archaeplastida
LOC_Os02g44630.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
LOC_Os05g11560.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.04 Archaeplastida
LOC_Os10g36924.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.07 Archaeplastida
Pp3c12_22530V3.1 No alias plasma membrane intrinsic protein 2A 0.02 Archaeplastida
Pp3c12_22590V3.1 No alias plasma membrane intrinsic protein 2A 0.01 Archaeplastida
Pp3c13_18810V3.1 No alias plasma membrane intrinsic protein 1B 0.03 Archaeplastida
Pp3c4_14920V3.1 No alias NOD26-like intrinsic protein 5;1 0.03 Archaeplastida
Smo410562 No alias No description available 0.03 Archaeplastida
Solyc06g060760.3.1 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida
Solyc08g013730.3.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.03 Archaeplastida
Zm00001e014388_P002 No alias Nodulin-26-like intrinsic protein (NIP) 0.03 Archaeplastida
Zm00001e016801_P001 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000425 MIP 35 245
No external refs found!