1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g07922.1

LOC_Os11g07922.1


Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana (sp|a2rvm0|tic32_arath : 354.0)


Gene families : OG0000289 (Archaeplastida) Phylogenetic Tree(s): OG0000289_tree ,
OG_05_0000631 (LandPlants) Phylogenetic Tree(s): OG_05_0000631_tree ,
OG_06_0003449 (SeedPlants) Phylogenetic Tree(s): OG_06_0003449_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g07922.1
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AT4G11410 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
Cre09.g398252 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.01 Archaeplastida
LOC_Os10g40020.3 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 Archaeplastida
MA_125991g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.09 Archaeplastida
MA_265629g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_61875g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.06 Archaeplastida
Pp3c21_9830V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.01 Archaeplastida
Smo420931 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida
Smo439201 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.05 Archaeplastida
Smo85319 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 Archaeplastida
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 37 247
No external refs found!