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  5. AMTR_s00010p00262550

AMTR_s00010p00262550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.471

Description : Extracellular ribonuclease LE OS=Solanum lycopersicum


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0002179 (LandPlants) Phylogenetic Tree(s): OG_05_0002179_tree ,
OG_06_0002586 (SeedPlants) Phylogenetic Tree(s): OG_06_0002586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00262550
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00084600 evm_27.TU.AmTr_v1... Ribonuclease 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G14210 No alias Ribonuclease T2 family protein 0.03 Archaeplastida
GSVIVT01010088001 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 Archaeplastida
Gb_41024 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os07g43670.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g33710.1 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.03 Archaeplastida
LOC_Os09g36700.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_4032367g0010 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9272140g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_95383g0020 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo270532 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.02 Archaeplastida
Solyc05g007940.3.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc05g007950.4.1 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 23 208
No external refs found!