LOC_Os11g14130.1


Description : transcription factor (mTERF)


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g14130.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.08 Archaeplastida
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00239860 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00060p00059830 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036100 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 Archaeplastida
AMTR_s00126p00036560 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT5G07900 No alias Mitochondrial transcription termination factor family protein 0.02 Archaeplastida
GSVIVT01017772001 No alias RNA biosynthesis.organelle... 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
GSVIVT01028382001 No alias RNA biosynthesis.organelle... 0.03 Archaeplastida
Gb_00751 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.05 Archaeplastida
Gb_12989 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_15298 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.06 Archaeplastida
Gb_23054 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.03 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.05 Archaeplastida
MA_10426325g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_10429074g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_2589g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_31885g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_81581g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_92135g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
Solyc02g082010.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Solyc04g011700.2.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e031638_P001 No alias transcription factor (mTERF) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 86 340
No external refs found!