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  5. AMTR_s00010p00264980

AMTR_s00010p00264980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.506

Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0002528 (SeedPlants) Phylogenetic Tree(s): OG_06_0002528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00264980
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.07 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.05 Archaeplastida
AT4G38210 ATEXPA20,... expansin A20 0.06 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.09 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Gb_01504 No alias alpha-class expansin 0.06 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.02 Archaeplastida
Gb_09118 No alias alpha-class expansin 0.03 Archaeplastida
Gb_20678 No alias alpha-class expansin 0.04 Archaeplastida
Gb_34121 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16809.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g60720.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_134592g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_792493g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_9572318g0010 No alias Expansin-A3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g03930.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g10160.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.04 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c3_37280V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_13450V3.1 No alias expansin A1 0.02 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo419575 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc05g007830.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc06g076220.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e019433_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e040578_P001 No alias alpha-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 60 144
No external refs found!