LOC_Os11g17430.1

Description : transcription factor (FAR1)

Gene families : OG0008742 (Archaeplastida) Phylogenetic Tree(s): OG0008742_tree ,
OG_05_0008126 (LandPlants) Phylogenetic Tree(s): OG_05_0008126_tree ,
OG_06_0005134 (SeedPlants) Phylogenetic Tree(s): OG_06_0005134_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g17430.1
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g37310.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os01g63030.1	No alias	transcription factor (FAR1)	0.07	Archaeplastida
LOC_Os02g31850.1	No alias	transcription factor (FAR1)	0.06	Archaeplastida
LOC_Os03g12490.1	No alias	transcription factor (FAR1)	0.12	Archaeplastida
LOC_Os04g04400.1	No alias	transcription factor (FAR1)	0.02	Archaeplastida
LOC_Os05g39480.1	No alias	transcription factor (FAR1)	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	414	493
IPR007527	Znf_SWIM	886	907
IPR018289	MULE_transposase_dom	590	683

External Links

No external refs found!