LOC_Os11g17530.2


Description : Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana (sp|q9zut4|pp192_arath : 402.0)


Gene families : OG0012963 (Archaeplastida) Phylogenetic Tree(s): OG0012963_tree ,
OG_05_0012923 (LandPlants) Phylogenetic Tree(s): OG_05_0012923_tree ,
OG_06_0012207 (SeedPlants) Phylogenetic Tree(s): OG_06_0012207_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g17530.2
Cluster HCCA: Cluster_360

Target Alias Description ECC score Gene Family Method Actions
Zm00001e040855_P003 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
BP GO:0017007 protein-bilin linkage IEP Neighborhood
BP GO:0017009 protein-phycocyanobilin linkage IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 284 331
IPR002885 Pentatricopeptide_repeat 360 380
IPR002885 Pentatricopeptide_repeat 459 483
IPR002885 Pentatricopeptide_repeat 388 416
No external refs found!