AMTR_s00010p00266320 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.523

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00010p00266320
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00113p00077540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AT1G26870	FEZ, ANAC009	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.02	Archaeplastida
AT4G10350	ANAC070, BRN2, NAC070	NAC domain containing protein 70	0.03	Archaeplastida
GSVIVT01008839001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01013419001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01020384001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020394001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
Gb_04998	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_35048	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g66120.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os04g45340.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
LOC_Os06g01230.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
LOC_Os12g41680.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp4g11910.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c16_23260V3.1	No alias	NAC domain containing protein 35	0.03	Archaeplastida
Pp3c20_18130V3.1	No alias	NAC domain containing protein 2	0.02	Archaeplastida
Pp3c5_570V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c6_1310V3.1	No alias	NAC domain containing protein 70	0.02	Archaeplastida
Smo105213	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Smo71404	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Solyc01g009860.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g063430.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc08g077110.4.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e004141_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e012982_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e015250_P001	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e024549_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e039031_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e039059_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
MF	GO:0015238	drug transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015893	drug transport	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	18	148

External Links

No external refs found!

AMTR_s00010p00266320 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation