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  5. LOC_Os11g23170.1

LOC_Os11g23170.1


Description : arginine/ornithine transporter. solute transporter (MTCC)


Gene families : OG0001302 (Archaeplastida) Phylogenetic Tree(s): OG0001302_tree ,
OG_05_0007108 (LandPlants) Phylogenetic Tree(s): OG_05_0007108_tree ,
OG_06_0007375 (SeedPlants) Phylogenetic Tree(s): OG_06_0007375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g23170.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT2G33820 ATMBAC1, MBAC1 Mitochondrial substrate carrier family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001024.11 No alias Solute transport.carrier-mediated transport.MC-type... 0.01 Archaeplastida
Solyc10g009090.3.1 No alias arginine/ornithine transporter. solute transporter (MTCC) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 112 195
IPR018108 Mitochondrial_sb/sol_carrier 7 98
IPR018108 Mitochondrial_sb/sol_carrier 220 256
No external refs found!