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  5. LOC_Os11g28350.1

LOC_Os11g28350.1


Description : scaffolding subunit TFB3 of CAK kinase module. component TFB3 of TFIIh basal transcription factor complex


Gene families : OG0003918 (Archaeplastida) Phylogenetic Tree(s): OG0003918_tree ,
OG_05_0004522 (LandPlants) Phylogenetic Tree(s): OG_05_0004522_tree ,
OG_06_0005048 (SeedPlants) Phylogenetic Tree(s): OG_06_0005048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g28350.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Mp2g25930.1 No alias scaffolding subunit TFB3 of CAK kinase module. component... 0.02 Archaeplastida
Zm00001e036383_P001 No alias scaffolding subunit TFB3 of CAK kinase module. component... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005956 protein kinase CK2 complex IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015877 Cdk-activating_kinase_MAT1_cen 17 96
No external refs found!