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  5. LOC_Os11g29110.1

LOC_Os11g29110.1


Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum (sp|q7xa39|rga4_solbu : 129.0)


Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g29110.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT3G14470 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
GSVIVT01000635001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01000656001 No alias Putative disease resistance protein At3g14460... 0.07 Archaeplastida
GSVIVT01000663001 No alias Putative disease resistance protein At3g14460... 0.03 Archaeplastida
GSVIVT01004021001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01011193001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01013307001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01013310001 No alias Putative disease resistance RPP13-like protein 1... 0.05 Archaeplastida
GSVIVT01013533001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022851001 No alias Putative disease resistance RPP13-like protein 1... 0.06 Archaeplastida
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022937001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022941001 No alias Putative disease resistance RPP13-like protein 1... 0.06 Archaeplastida
GSVIVT01022947001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022963001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01023312001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01023320001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01023324001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01036628001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
LOC_Os08g43000.1 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.05 Archaeplastida
LOC_Os09g20030.1 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 315 483
No external refs found!