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  5. LOC_Os11g29890.1

LOC_Os11g29890.1


Description : no hits & (original description: none)


Gene families : OG0000596 (Archaeplastida) Phylogenetic Tree(s): OG0000596_tree ,
OG_05_0000323 (LandPlants) Phylogenetic Tree(s): OG_05_0000323_tree ,
OG_06_0000139 (SeedPlants) Phylogenetic Tree(s): OG_06_0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g29890.1
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g32690.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g33690.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g07680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g11290.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g14600.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g19890.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g29530.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g13910.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g30060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g24100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g28930.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g11040.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g11130.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g11190.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g24130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g18350.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g17090.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g19510.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g04820.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g06690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g10000.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g11490.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!