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  5. LOC_Os11g32100.1

LOC_Os11g32100.1


Description : transcription factor (bHLH). transcription factor (ICE1|2)


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0001343 (LandPlants) Phylogenetic Tree(s): OG_05_0001343_tree ,
OG_06_0001632 (SeedPlants) Phylogenetic Tree(s): OG_06_0001632_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g32100.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00078730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G10570 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01004405001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01008637001 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
Gb_36380 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os10g39750.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_10433418g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_20585g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.03 Archaeplastida
MA_336364g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_439607g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_89559g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_89559g0020 No alias Transcription factor ABORTED MICROSPORES OS=Arabidopsis... 0.06 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g04920.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.06 Archaeplastida
Mp8g06230.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c13_14400V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c13_14420V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo75047 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
Solyc02g079810.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc02g091690.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc05g005300.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.05 Archaeplastida
Solyc08g062780.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e008393_P001 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.02 Archaeplastida
Zm00001e010525_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e018755_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.04 Archaeplastida
Zm00001e021526_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.04 Archaeplastida
Zm00001e030156_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e040675_P003 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e040732_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 339 381
No external refs found!