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  5. AMTR_s00011p00125430

AMTR_s00011p00125430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.36

No description available


Gene families : OG0008391 (Archaeplastida) Phylogenetic Tree(s): OG0008391_tree ,
OG_05_0008069 (LandPlants) Phylogenetic Tree(s): OG_05_0008069_tree ,
OG_06_0005069 (SeedPlants) Phylogenetic Tree(s): OG_06_0005069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00125430
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00241530 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00162p00038390 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00201p00009940 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 5 59
No external refs found!