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  5. LOC_Os11g33942.1

LOC_Os11g33942.1


Description : no hits & (original description: none)


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0000062 (SeedPlants) Phylogenetic Tree(s): OG_06_0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g33942.1
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00151010 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00023p00171000 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 Archaeplastida
Gb_20052 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g21710.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os06g33350.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g33410.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g33450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g041500.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 33 190
No external refs found!