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  5. LOC_Os11g34080.1

LOC_Os11g34080.1


Description : no hits & (original description: none)


Gene families : OG0000354 (Archaeplastida) Phylogenetic Tree(s): OG0000354_tree ,
OG_05_0000233 (LandPlants) Phylogenetic Tree(s): OG_05_0000233_tree ,
OG_06_0000513 (SeedPlants) Phylogenetic Tree(s): OG_06_0000513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g34080.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AT3G12920 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Archaeplastida
AT4G17680 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Archaeplastida
AT4G35070 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Archaeplastida
AT5G45100 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Archaeplastida
GSVIVT01001126001 No alias No description available 0.03 Archaeplastida
Gb_07205 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_20174 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.02 Archaeplastida
Gb_20681 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 Archaeplastida
MA_126765g0010 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.02 Archaeplastida
Pp3c18_14950V3.1 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Archaeplastida
Zm00001e001146_P001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 Archaeplastida
Zm00001e005184_P001 No alias BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e008274_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e012302_P001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 Archaeplastida
Zm00001e024199_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!