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  5. LOC_Os11g34090.1

LOC_Os11g34090.1


Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 150.0)


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0000062 (SeedPlants) Phylogenetic Tree(s): OG_06_0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g34090.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00016p00254270 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00023p00150580 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00023p00162490 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT2G28580 No alias Plant protein of unknown function (DUF247) 0.04 Archaeplastida
AT2G44930 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.02 Archaeplastida
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.04 Archaeplastida
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
AT5G22560 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
GSVIVT01001131001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01033580001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_12420 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 Archaeplastida
Gb_41270 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g21650.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g37280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g42570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g009230.2.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g079520.1.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc10g079530.2.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc12g099300.1.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e011184_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004158 DUF247_pln 44 472
No external refs found!