1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g34200.1

LOC_Os11g34200.1


Description : component alpha of TATA box-binding protein NC2 regulator complex


Gene families : OG0002760 (Archaeplastida) Phylogenetic Tree(s): OG0002760_tree ,
OG_05_0003031 (LandPlants) Phylogenetic Tree(s): OG_05_0003031_tree ,
OG_06_0002988 (SeedPlants) Phylogenetic Tree(s): OG_06_0002988_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g34200.1
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01036581001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
MA_14798g0010 No alias component alpha of TATA box-binding protein NC2 regulator complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 8 71
No external refs found!