Description : component psPSRP6 of large ribosomal subunit proteome
Gene families : OG0009342 (Archaeplastida) Phylogenetic Tree(s): OG0009342_tree ,
OG_05_0010398 (LandPlants) Phylogenetic Tree(s): OG_05_0010398_tree ,
OG_06_0012839 (SeedPlants) Phylogenetic Tree(s): OG_06_0012839_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os11g34940.1 | |
Cluster | HCCA: Cluster_331 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G17870 | PSRP6 | plastid-specific 50S ribosomal protein 6 | 0.04 | Archaeplastida | |
Mp4g21280.1 | No alias | component psPSRP6 of large ribosomal subunit proteome | 0.12 | Archaeplastida | |
Pp3c3_11690V3.1 | No alias | plastid-specific 50S ribosomal protein 6 | 0.05 | Archaeplastida | |
Solyc04g077130.1.1 | No alias | component psPSRP6 of large ribosomal subunit proteome | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
CC | GO:0009507 | chloroplast | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Neighborhood |
MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0006450 | regulation of translational fidelity | IEP | Neighborhood |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0006826 | iron ion transport | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
BP | GO:0010207 | photosystem II assembly | IEP | Neighborhood |
BP | GO:0015994 | chlorophyll metabolic process | IEP | Neighborhood |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Neighborhood |
CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
BP | GO:0034755 | iron ion transmembrane transport | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Neighborhood |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR020526 | Ribosomal_L6_chp | 35 | 92 |
No external refs found! |