LOC_Os11g36470.1


Description : ubiquitin protease (USP7). deubiquitinase (UBP12-13)


Gene families : OG0000966 (Archaeplastida) Phylogenetic Tree(s): OG0000966_tree ,
OG_05_0001134 (LandPlants) Phylogenetic Tree(s): OG_05_0001134_tree ,
OG_06_0001034 (SeedPlants) Phylogenetic Tree(s): OG_06_0001034_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g36470.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00140970 evm_27.TU.AmTr_v1... Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT3G11910 UBP13 ubiquitin-specific protease 13 0.05 Archaeplastida
AT5G06600 UBP12 ubiquitin-specific protease 12 0.04 Archaeplastida
Cpa|evm.model.tig00000217.46 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00021350.29 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00021350.30 No alias Protein degradation.peptidase families.cysteine-type... 0.01 Archaeplastida
GSVIVT01022498001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
GSVIVT01034603001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
GSVIVT01037528001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
MA_10426331g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida
MA_10427483g0010 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
MA_10427483g0020 No alias deubiquitinase (UBP12-13) 0.04 Archaeplastida
MA_75085g0010 No alias deubiquitinase (UBP12-13) 0.06 Archaeplastida
Mp3g15430.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
Pp3c11_18780V3.1 No alias ubiquitin-specific protease 12 0.04 Archaeplastida
Pp3c15_15710V3.1 No alias ubiquitin-specific protease 12 0.02 Archaeplastida
Pp3c7_7420V3.1 No alias ubiquitin-specific protease 12 0.02 Archaeplastida
Smo444302 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
Solyc05g055090.4.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
Solyc10g081610.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.07 Archaeplastida
Solyc11g006320.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.03 Archaeplastida
Solyc11g071700.2.1 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.07 Archaeplastida
Zm00001e017788_P001 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida
Zm00001e019687_P003 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.04 Archaeplastida
Zm00001e024432_P001 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.07 Archaeplastida
Zm00001e032871_P004 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.1 Archaeplastida
Zm00001e039540_P003 No alias ubiquitin protease (USP7). deubiquitinase (UBP12-13) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004181 metallocarboxypeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008235 metalloexopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR029346 USP_C 707 916
IPR001394 Peptidase_C19_UCH 16 341
IPR024729 USP7_ICP0-binding_dom 445 697
No external refs found!