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  5. LOC_Os11g38300.1

LOC_Os11g38300.1


Description : no hits & (original description: none)


Gene families : OG0000538 (Archaeplastida) Phylogenetic Tree(s): OG0000538_tree ,
OG_05_0000814 (LandPlants) Phylogenetic Tree(s): OG_05_0000814_tree ,
OG_06_0000441 (SeedPlants) Phylogenetic Tree(s): OG_06_0000441_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g38300.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g14200.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g37580.1 No alias Replication protein A 70 kDa DNA-binding subunit B... 0.04 Archaeplastida
LOC_Os01g43980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g06230.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 1139 1504
IPR025476 Helitron_helicase-like 571 734
IPR003840 DNA_helicase 1544 1596
No external refs found!