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  5. LOC_Os11g43750.1

LOC_Os11g43750.1


Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 411.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 57.9)


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree ,
OG_06_0001972 (SeedPlants) Phylogenetic Tree(s): OG_06_0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g43750.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT1G19170 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT2G23900 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G06770 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G42950 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT4G23820 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01015044001 No alias Probable polygalacturonase OS=Vitis vinifera 0.06 Archaeplastida
GSVIVT01035089001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
Gb_06212 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
Gb_23153 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
MA_10435166g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c19_14240V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Zm00001e006249_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Zm00001e021051_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.07 Archaeplastida
Zm00001e023760_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
Zm00001e034257_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 130 413
No external refs found!