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  5. LOC_Os11g43900.1

LOC_Os11g43900.1


Description : Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica (sp|p35681|tctp_orysj : 303.0)


Gene families : OG0002639 (Archaeplastida) Phylogenetic Tree(s): OG0002639_tree ,
OG_05_0002449 (LandPlants) Phylogenetic Tree(s): OG_05_0002449_tree ,
OG_06_0002283 (SeedPlants) Phylogenetic Tree(s): OG_06_0002283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g43900.1
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00225280 evm_27.TU.AmTr_v1... Translationally-controlled tumor protein homolog... 0.05 Archaeplastida
AT3G16640 TCTP translationally controlled tumor protein 0.12 Archaeplastida
GSVIVT01017723001 No alias Translationally-controlled tumor protein homolog... 0.06 Archaeplastida
MA_724304g0010 No alias Translationally-controlled tumor protein homolog... 0.04 Archaeplastida
Mp2g26040.1 No alias Translationally-controlled tumor protein homolog... 0.04 Archaeplastida
Solyc01g099770.3.1 No alias Translationally-controlled tumor protein homolog... 0.11 Archaeplastida
Zm00001e013417_P002 No alias Translationally-controlled tumor protein homolog OS=Zea... 0.04 Archaeplastida
Zm00001e013418_P001 No alias Translationally-controlled tumor protein homolog OS=Zea... 0.04 Archaeplastida
Zm00001e013419_P001 No alias Translationally-controlled tumor protein homolog OS=Zea... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018105 Translational_control_tumour_p 1 164
No external refs found!