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  5. AMTR_s00011p00234400

AMTR_s00011p00234400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.122

No description available


Gene families : OG0001936 (Archaeplastida) Phylogenetic Tree(s): OG0001936_tree ,
OG_05_0002624 (LandPlants) Phylogenetic Tree(s): OG_05_0002624_tree ,
OG_06_0002733 (SeedPlants) Phylogenetic Tree(s): OG_06_0002733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00234400
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021098.6 No alias No description available 0.01 Archaeplastida
LOC_Os06g51390.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
InterPro domains Description Start Stop
IPR008547 DUF829_TMEM53 52 277
No external refs found!