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  5. LOC_Os11g45560.1

LOC_Os11g45560.1


Description : BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana (sp|q8l765|bpm1_arath : 133.0)


Gene families : OG0000128 (Archaeplastida) Phylogenetic Tree(s): OG0000128_tree ,
OG_05_0023095 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0022385 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g45560.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g20690.1 No alias BTB/POZ and MATH domain-containing protein 2... 0.06 Archaeplastida
LOC_Os08g03510.1 No alias BTB/POZ and MATH domain-containing protein 2... 0.04 Archaeplastida
LOC_Os10g29370.1 No alias BTB/POZ and MATH domain-containing protein 2... 0.04 Archaeplastida
LOC_Os10g29380.1 No alias BTB/POZ and MATH domain-containing protein 3... 0.06 Archaeplastida
Mp6g14350.1 No alias BTB/POZ and MATH domain-containing protein 4... 0.02 Archaeplastida
Zm00001e003615_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e005040_P001 No alias BTB/POZ and MATH domain-containing protein 2... 0.02 Archaeplastida
Zm00001e030370_P001 No alias BTB/POZ and MATH domain-containing protein 2... 0.04 Archaeplastida
Zm00001e030372_P002 No alias BTB/POZ and MATH domain-containing protein 1... 0.05 Archaeplastida
Zm00001e033378_P002 No alias BTB/POZ and MATH domain-containing protein 2... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 202 318
No external refs found!