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  5. AMTR_s00011p00238390

AMTR_s00011p00238390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.131

No description available


Gene families : OG0003084 (Archaeplastida) Phylogenetic Tree(s): OG0003084_tree ,
OG_05_0002086 (LandPlants) Phylogenetic Tree(s): OG_05_0002086_tree ,
OG_06_0001140 (SeedPlants) Phylogenetic Tree(s): OG_06_0001140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00238390
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G63310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
AT1G75260 No alias oxidoreductases, acting on NADH or NADPH 0.03 Archaeplastida
AT2G46630 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.03 Archaeplastida
GSVIVT01027399001 No alias No description available 0.03 Archaeplastida
Gb_06276 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g01500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10430830g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_281628g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g066860.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g080520.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc08g067370.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g099590.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e008811_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e017152_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e040498_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!