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  5. LOC_Os11g47460.1

LOC_Os11g47460.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g47460.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00019p00201260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00024p00249750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00145p00098450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.03 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.02 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.02 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.03 Archaeplastida
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.03 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.05 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.04 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G40430 MYB22, AtMYB22 myb domain protein 22 0.02 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01015574001 No alias Transcription factor MYB82 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016767001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02419 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_22096 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_23187 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_27374 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29520 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os04g50680.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139448g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_214345g0020 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_21440g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_22140g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_64405g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_926162g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc11g073120.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e010251_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012156_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015125_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e018391_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e021349_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e023024_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028201_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029601_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030293_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e033519_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041551_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e041553_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 10 57
IPR001005 SANT/Myb 64 107
No external refs found!