1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00011p00247840

AMTR_s00011p00247840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.148

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000767 (LandPlants) Phylogenetic Tree(s): OG_05_0000767_tree ,
OG_06_0000381 (SeedPlants) Phylogenetic Tree(s): OG_06_0000381_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00247840
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.02 Archaeplastida
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_11171 No alias transcription factor (MYB-related) 0.06 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc04g080500.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!