AMTR_s00011p00251570 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.156

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00011p00251570
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.04	Archaeplastida
AT1G26870	FEZ, ANAC009	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.07	Archaeplastida
AT1G54330	ANAC020, NAC020	NAC domain containing protein 20	0.06	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.05	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.04	Archaeplastida
AT1G79580	SMB, ANAC033	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT3G03200	anac045, NAC045	NAC domain containing protein 45	0.02	Archaeplastida
AT3G04060	anac046, NAC046	NAC domain containing protein 46	0.02	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.03	Archaeplastida
AT3G17730	anac057, NAC057	NAC domain containing protein 57	0.02	Archaeplastida
AT4G10350	ANAC070, BRN2, NAC070	NAC domain containing protein 70	0.04	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.05	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.04	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.02	Archaeplastida
AT5G17260	NAC086, anac086	NAC domain containing protein 86	0.04	Archaeplastida
AT5G39820	NAC094, anac094	NAC domain containing protein 94	0.03	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.04	Archaeplastida
GSVIVT01001264001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01008601001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01013419001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01014287001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01016176001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01018623001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01029392001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01035214001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os07g48550.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_112054g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_6777g0010	No alias	No annotation	0.03	Archaeplastida
MA_95225g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c12_18020V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.02	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g081270.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc03g080090.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc03g083880.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e008026_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e014291_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e021847_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023019_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.08	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e038258_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006596	polyamine biosynthetic process	IEP	Neighborhood
BP	GO:0006597	spermine biosynthetic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0008215	spermine metabolic process	IEP	Neighborhood
BP	GO:0008216	spermidine metabolic process	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0008295	spermidine biosynthetic process	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009309	amine biosynthetic process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0097164	ammonium ion metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	136

External Links

No external refs found!

AMTR_s00011p00251570 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation