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  5. LOC_Os12g02830.2

LOC_Os12g02830.2


Description : component VPS32/SNF7 of ESCRT-III complex


Gene families : OG0001223 (Archaeplastida) Phylogenetic Tree(s): OG0001223_tree ,
OG_05_0001557 (LandPlants) Phylogenetic Tree(s): OG_05_0001557_tree ,
OG_06_0017629 (SeedPlants) Phylogenetic Tree(s): OG_06_0017629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g02830.2

Target Alias Description ECC score Gene Family Method Actions
Mp6g10770.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
Pp3c8_3630V3.1 No alias SNF7 family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 27 188
No external refs found!