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  5. AMTR_s00011p00253490

AMTR_s00011p00253490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.163

Description : ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana


Gene families : OG0000285 (Archaeplastida) Phylogenetic Tree(s): OG0000285_tree ,
OG_05_0003097 (LandPlants) Phylogenetic Tree(s): OG_05_0003097_tree ,
OG_06_0003677 (SeedPlants) Phylogenetic Tree(s): OG_06_0003677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00253490
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G50140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Solyc02g014350.4.1 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 Archaeplastida
Solyc03g082630.3.1 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 Archaeplastida
Zm00001e030175_P002 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0044183 protein binding involved in protein folding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 122 219
No external refs found!