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  5. LOC_Os12g04110.1

LOC_Os12g04110.1


Description : Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana (sp|q9ssr4|ppr77_arath : 583.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 81.9)


Gene families : OG0000033 (Archaeplastida) Phylogenetic Tree(s): OG0000033_tree ,
OG_05_0000370 (LandPlants) Phylogenetic Tree(s): OG_05_0000370_tree ,
OG_06_0000215 (SeedPlants) Phylogenetic Tree(s): OG_06_0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g04110.1
Cluster HCCA: Cluster_56


Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 576 769
IPR002885 Pentatricopeptide_repeat 1287 1319
IPR002885 Pentatricopeptide_repeat 1011 1058
IPR002885 Pentatricopeptide_repeat 1221 1269
IPR002885 Pentatricopeptide_repeat 1396 1443
IPR002885 Pentatricopeptide_repeat 1151 1198
IPR002885 Pentatricopeptide_repeat 1484 1530
IPR002885 Pentatricopeptide_repeat 1329 1375
IPR002885 Pentatricopeptide_repeat 1081 1130
IPR002885 Pentatricopeptide_repeat 946 972
IPR001128 Cyt_P450 35 483
No external refs found!