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  5. LOC_Os12g04820.1

LOC_Os12g04820.1


Description : no hits & (original description: none)


Gene families : OG0000596 (Archaeplastida) Phylogenetic Tree(s): OG0000596_tree ,
OG_05_0000323 (LandPlants) Phylogenetic Tree(s): OG_05_0000323_tree ,
OG_06_0000139 (SeedPlants) Phylogenetic Tree(s): OG_06_0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g04820.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g33690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g11290.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g11610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g19890.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g13910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g14610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g19990.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os06g28930.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g24130.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os08g28250.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g01870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g16470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g14840.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g29890.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g10000.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!